/ New distfiles found via the portscout scanner Wed, 2 Sep 2026 23:24:58 +0000 jwb@freebsd.org portscout v0.8.1, by Shaun Amott /jwb@freebsd.org.html Update found for port biology/salmon: version 1.10.3 to v2.7.0 jwb@freebsd.org biology/salmon/1.10.3/v2.7.0 Mon, 31 Aug 2026 03:51:05 -0000 salmon http://www.freshports.org/biology/salmon/ Wed, 2 Sep 2026 03:32:44 -0000 v2.7.0 https://api.github.com/repos/COMBINE-lab/salmon/tarball/v2.7.0 1.10.3 Wed, 2 Sep 2026 02:03:22 -0000 biology http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=biology%2Fsalmon /jwb@freebsd.org.html Update found for port biology/bifrost: version 1.3.9 to paper jwb@freebsd.org biology/bifrost/1.3.9/paper Wed, 12 Aug 2026 04:01:36 -0000 paper Wed, 2 Sep 2026 03:01:36 -0000 https://api.github.com/repos/pmelsted/bifrost/tarball/paper bifrost http://www.freshports.org/biology/bifrost/ biology http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=biology%2Fbifrost 1.3.9 Wed, 2 Sep 2026 02:03:35 -0000 /jwb@freebsd.org.html Update found for port science/csvtk: version 0.37.0 to v0.47.0 jwb@freebsd.org science/csvtk/0.37.0/v0.47.0 Thu, 9 Jul 2026 03:14:28 -0000 csvtk http://www.freshports.org/science/csvtk/ v0.47.0 Wed, 2 Sep 2026 03:23:55 -0000 https://api.github.com/repos/golang/sys/tarball/refs/tags/v0.47.0 0.37.0 Wed, 2 Sep 2026 02:33:35 -0000 http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=science%2Fcsvtk science /jwb@freebsd.org.html Update found for port biology/mmseqs2: version 17-b804f to vnatbiotech jwb@freebsd.org biology/mmseqs2/17-b804f/vnatbiotech Sat, 20 Jun 2026 19:25:28 -0000 17-b804f Wed, 2 Sep 2026 02:03:27 -0000 biology http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=biology%2Fmmseqs2 mmseqs2 http://www.freshports.org/biology/mmseqs2/ vnatbiotech Wed, 2 Sep 2026 02:51:20 -0000 https://api.github.com/repos/soedinglab/MMseqs2/tarball/vNatBiotech /jwb@freebsd.org.html Update found for port biology/bfc: version g20150417 to submitted-v1 jwb@freebsd.org biology/bfc/g20150417/submitted-v1 Sat, 20 Jun 2026 18:46:14 -0000 https://api.github.com/repos/lh3/bfc/tarball/refs/tags/submitted-v1 Wed, 2 Sep 2026 03:55:41 -0000 submitted-v1 http://www.freshports.org/biology/bfc/ bfc biology http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=biology%2Fbfc Wed, 2 Sep 2026 02:03:22 -0000 g20150417 /jwb@freebsd.org.html Update found for port biology/vcflib: version 1.0.13 to v1.0.15 jwb@freebsd.org biology/vcflib/1.0.13/v1.0.15 Sat, 20 Jun 2026 18:45:48 -0000 https://api.github.com/repos/vcflib/vcflib/tarball/v1.0.15 Wed, 2 Sep 2026 04:30:06 -0000 v1.0.15 http://www.freshports.org/biology/vcflib/ vcflib biology http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=biology%2Fvcflib Wed, 2 Sep 2026 02:03:34 -0000 1.0.13 /jwb@freebsd.org.html Update found for port biology/sra-tools: version 3.4.1 to vdb-4760-2.9.7 jwb@freebsd.org biology/sra-tools/3.4.1/vdb-4760-2.9.7 Sat, 20 Jun 2026 18:12:59 -0000 http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=biology%2Fsra-tools biology Wed, 2 Sep 2026 02:03:35 -0000 3.4.1 https://api.github.com/repos/ncbi/sra-tools/tarball/refs/tags/VDB-4760-2.9.7 Wed, 2 Sep 2026 02:45:10 -0000 vdb-4760-2.9.7 http://www.freshports.org/biology/sra-tools/ sra-tools /jwb@freebsd.org.html Update found for port comms/cutecom: version 0.60.0 to 1.00.0 jwb@freebsd.org comms/cutecom/0.60.0/1.00.0 Thu, 23 Apr 2026 03:47:40 -0000 cutecom http://www.freshports.org/comms/cutecom/ Wed, 2 Sep 2026 03:32:10 -0000 1.00.0 https://gitlab.com/cutecom/cutecom/-/archive/v0.60.0-RC1/cutecom-v1.00.0-RC1.tar.bz2 0.60.0 Wed, 2 Sep 2026 02:04:16 -0000 comms http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=comms%2Fcutecom /jwb@freebsd.org.html Update found for port biology/stacks: version 2.68 to 2.69 jwb@freebsd.org biology/stacks/2.68/2.69 Sat, 18 Jan 2025 03:42:59 -0000 2.68 Wed, 2 Sep 2026 02:03:37 -0000 biology http://www.freebsd.org/cgi/query-pr-summary.cgi?category=ports&text=biology%2Fstacks stacks http://www.freshports.org/biology/stacks/ Wed, 2 Sep 2026 02:50:30 -0000 2.69 https://catchenlab.life.illinois.edu/stacks/source/stacks-2.69.tar.gz